What if creationists like your paper about evolution?

Institution of Creation research

Recently, my last paper that I have worked on before I started Paperpile was finally published. I’m quite happy with the work because it brings together my favourite topics: RNAs, genomes and evolution. Unfortunately, I did not have much time following up on the reception of the paper. However, there was at least one review on the web I did not miss.

Continue reading “What if creationists like your paper about evolution?”

Walking through a Digital Memorial: the #pdftribute PDFs


Aaron Sartz #pdftribute photomosaic

Aaron Swartz was a vocal proponent of a free and open Internet and a staunch believer in open access. His Guerilla Open Access Manifesto, written in 2008, is just as powerful and relevant to the world of academic publishing today as it was 6 years ago.

A little over a year ago, the Internet began mourning the loss of this well-loved entrepreneur and pioneer. Tech-savvy academics were shocked by Aaron’s death; some were upset at the handling of his legal case while others called on universities to respond by doubling down on open access to the scientific literature. Meanwhile, the news media were left struggling to explain just what JSTOR was and why Aaron was potentially facing years in prison for downloading a bunch of PDFs.

And then, academics joined together worldwide in a small act of defiant tribute.

Continue reading “Walking through a Digital Memorial: the #pdftribute PDFs”

Making friends with linked data

Linking between publishers and databases

One thing that the Internet couldn’t live without is links. In fact, the Web is pretty much defined as a collection of links between virtual resources, and a fundamental part of good web citizenship is providing links to related pieces of content. Helpful, working links are vital to the health of the web.

So it goes with papers. In today’s complex ecosystem of academic publishing, a single research project may yield several distinct web-based outputs: a preprint manuscript here, peer-reviewed paper here, and dataset over there. The ease with which an author can now disseminate her different research outputs is incredible. With sites like Arxiv, Figshare, Dryad and the nascent Peerage of Science, your data, figures, and manuscripts can live in many different places on the road toward publication.

However, a healthy Web doesn’t necessarily mean a healthy Web for scientists. If websites and search engines aren’t providing the links you need to effectively mine the literature, you’re stuck. Which is why for this post, we stepped into the world-wide web for research and asked whether our papers are getting the links that we, as authors and readers, deserve.

Continue reading “Making friends with linked data”