How to format your references using the Microbial Pathogenesis citation style

This is a short guide how to format citations and the bibliography in a manuscript for Microbial Pathogenesis. For a complete guide how to prepare your manuscript refer to the journal's instructions to authors.

Using reference management software

Typically you don't format your citations and bibliography by hand. The easiest way is to use a reference manager:

PaperpileThe citation style is built in and you can choose it in Settings > Citation Style or Paperpile > Citation Style in Google Docs.
EndNoteDownload the output style file
Mendeley, Zotero, Papers, and othersThe style is either built in or you can download a CSL file that is supported by most references management programs.
BibTeXBibTeX syles are usually part of a LaTeX template. Check the instructions to authors if the publisher offers a LaTeX template for this journal.

Journal articles

Those examples are references to articles in scholarly journals and how they are supposed to appear in your bibliography.

Not all journals organize their published articles in volumes and issues, so these fields are optional. Some electronic journals do not provide a page range, but instead list an article identifier. In a case like this it's safe to use the article identifier instead of the page range.

A journal article with 1 author
D. Yeomans, Small bodies of the Solar System, Nature. 404 (2000) 829–832.
A journal article with 2 authors
B.A. Liang, T. Mackey, Health care policy. Reforming off-label promotion to enhance orphan disease treatment, Science. 327 (2010) 273–274.
A journal article with 3 authors
J.R. Kuhn, M. Emilio, R. Bush, Comment on “A large excess in apparent solar oblateness due to surface magnetism,” Science. 324 (2009) 1143; author reply 1143.
A journal article with 4 or more authors
H. Yu, A.K. Tieu, C. Lu, X. Liu, A. Godbole, H. Li, C. Kong, Q. Qin, A deformation mechanism of hard metal surrounded by soft metal during roll forming, Sci. Rep. 4 (2014) 5017.

Books and book chapters

Here are examples of references for authored and edited books as well as book chapters.

An authored book
L.V. Yakushevich, Nonlinear Physics of DNA, Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim, FRG, 2005.
An edited book
M. Pokorski, ed., Neurotransmitter Interactions and Cognitive Function, Springer International Publishing, Cham, 2015.
A chapter in an edited book
W.F.A. den Dunnen, A.J.H. Suurmeijer, R.V. Proença, C. Herzog, J.M. Groen, M.J.W. Greuter, M. Oudkerk, A. Schmermund, S. Möhlenkamp, R. Erbel, J.C.M. Witteman, A.E. Stillman, S.S. Halliburton, W.A. Kalender, C.H. McCollough, L.J. Shaw, W. Stanford, A.J. Taylor, P.M.A. van Ooijen, L. Wexler, P. Raggi, Non-Invasive Measurement of Coronary Atherosclerosis, in: M. Oudkerk, M.F. Reiser (Eds.), Coronary Radiology, Springer, Berlin, Heidelberg, 2009: pp. 205–295.

Web sites

Sometimes references to web sites should appear directly in the text rather than in the bibliography. Refer to the Instructions to authors for Microbial Pathogenesis.

Blog post
E. Andrew, Breast Milk Custom Formulated For Baby’s Gender, IFLScience. (2014).’s-gender/ (accessed October 30, 2018).


This example shows the general structure used for government reports, technical reports, and scientific reports. If you can't locate the report number then it might be better to cite the report as a book. For reports it is usually not individual people that are credited as authors, but a governmental department or agency like "U. S. Food and Drug Administration" or "National Cancer Institute".

Government report
Government Accountability Office, Options to Enhance the Long-term Viability of the Essential Air Service Program, U.S. Government Printing Office, Washington, DC, 2002.

Theses and dissertations

Theses including Ph.D. dissertations, Master's theses or Bachelor theses follow the basic format outlined below.

Doctoral dissertation
R. Rangwala, The Role of the PDZ Protein, Erbin, in Schwann Cells, Doctoral dissertation, University of Cincinnati, 2005.

News paper articles

Unlike scholarly journals, news papers do not usually have a volume and issue number. Instead, the full date and page number is required for a correct reference.

New York Times article
P. Baker, M.D. Shear, Shifting Tone, President Saves Dark Words for a Faith’s Fringe, New York Times. (2017) A1.

In-text citations

References should be cited in the text by sequential numbers in square brackets:

This sentence cites one reference [1].
This sentence cites two references [1,2].
This sentence cites four references [1–4].

About the journal

Full journal titleMicrobial Pathogenesis
AbbreviationMicrob. Pathog.
ISSN (print)0882-4010
Infectious Diseases

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