How to format your references using the Theoretical Biology and Medical Modelling citation style

This is a short guide how to format citations and the bibliography in a manuscript for Theoretical Biology and Medical Modelling. For a complete guide how to prepare your manuscript refer to the journal's instructions to authors.

Using reference management software

Typically you don't format your citations and bibliography by hand. The easiest way is to use a reference manager:

PaperpileThe citation style is built in and you can choose it in Settings > Citation Style or Paperpile > Citation Style in Google Docs.
EndNoteDownload the output style file
Mendeley, Zotero, Papers, and othersThe style is either built in or you can download a CSL file that is supported by most references management programs.
BibTeXBibTeX syles are usually part of a LaTeX template. Check the instructions to authors if the publisher offers a LaTeX template for this journal.

Journal articles

Those examples are references to articles in scholarly journals and how they are supposed to appear in your bibliography.

Not all journals organize their published articles in volumes and issues, so these fields are optional. Some electronic journals do not provide a page range, but instead list an article identifier. In a case like this it's safe to use the article identifier instead of the page range.

A journal article with 1 author
1. Varis O. Resources: Curb vast water use in central Asia. Nature. 2014;514:27–9.
A journal article with 2 authors
1. Thiel PA, Dubois JM. Quasicrystals. Electrons in a strange sea. Nature. 2000;406:570–1, 573.
A journal article with 3 authors
1. Bloch I I, Hansch TW, Esslinger T. Measurement of the spatial coherence of a trapped Bose gas at the phase transition. Nature. 2000;403:166–70.
A journal article with 7 or more authors
1. Cheng C, Guo H, Amini A, Liu K, Fu D, Zou J, et al. Self-assembly and horizontal orientation growth of VO2 nanowires. Sci Rep. 2014;4:5456.

Books and book chapters

Here are examples of references for authored and edited books as well as book chapters.

An authored book
1. Baker HK, English P. Capital Budgeting Valuation. Hoboken, NJ: John Wiley & Sons, Inc.; 2011.
An edited book
1. Ullah AA. Asian Immigrants in North America with HIV/AIDS: Stigma, Vulnerabilities and Human Rights. Huque AS, editor. Singapore: Springer; 2014.
A chapter in an edited book
1. ElKady SK, Abdelsalam HM. A Modified Particle Swarm Optimization Algorithm for Solving Capacitated Maximal Covering Location Problem in Healthcare Systems. In: Hassanien A-E, Grosan C, Fahmy Tolba M, editors. Applications of Intelligent Optimization in Biology and Medicine: Current Trends and Open Problems. Cham: Springer International Publishing; 2016. p. 117–33.

Web sites

Sometimes references to web sites should appear directly in the text rather than in the bibliography. Refer to the Instructions to authors for Theoretical Biology and Medical Modelling.

Blog post
1. Hamilton K. How DNA Evidence Could Be A Game-Changer In Monitoring Freshwater Fish. IFLScience. IFLScience; 2016.


This example shows the general structure used for government reports, technical reports, and scientific reports. If you can't locate the report number then it might be better to cite the report as a book. For reports it is usually not individual people that are credited as authors, but a governmental department or agency like "U. S. Food and Drug Administration" or "National Cancer Institute".

Government report
1. Government Accountability Office. Inquiry About the Research Grant To Develop a Portable Computer To Record Traffic Information for Verifying the Accuracy of Charges for Telecommunications Service. Washington, DC: U.S. Government Printing Office; 1974 Mar. Report No.: B-180444.

Theses and dissertations

Theses including Ph.D. dissertations, Master's theses or Bachelor theses follow the basic format outlined below.

Doctoral dissertation
1. Lauper AR. Effects of leadership training and networking opportunities on professional advancement: A quantitative study [Doctoral dissertation]. [Phoenix, AZ]: University of Phoenix; 2009.

News paper articles

Unlike scholarly journals, news papers do not usually have a volume and issue number. Instead, the full date and page number is required for a correct reference.

New York Times article
1. Crow K. Fireman’s Spirit Is the Wind Beneath a Bird’s Wings. New York Times. 2001 Nov 11;146.

In-text citations

References should be cited in the text by sequential numbers in square brackets:

This sentence cites one reference [1].
This sentence cites two references [1,2].
This sentence cites four references [1–4].

About the journal

Full journal titleTheoretical Biology and Medical Modelling
AbbreviationTheor. Biol. Med. Model.
ISSN (online)1742-4682
ScopeModelling and Simulation
Health Informatics

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