How to format your references using the Nature Methods citation style

This is a short guide how to format citations and the bibliography in a manuscript for Nature Methods. For a complete guide how to prepare your manuscript refer to the journal's instructions to authors.

Using reference management software

Typically you don't format your citations and bibliography by hand. The easiest way is to use a reference manager:

Paperpile	The citation style is built in and you can choose it in Settings > Citation Style or Paperpile > Citation Style in Google Docs.
EndNote	Download the output style file
Mendeley, Zotero, Papers, and others	The style is either built in or you can download a CSL file that is supported by most references management programs.
BibTeX	BibTeX syles are usually part of a LaTeX template. Check the instructions to authors if the publisher offers a LaTeX template for this journal.

Journal articles

Those examples are references to articles in scholarly journals and how they are supposed to appear in your bibliography.

Not all journals organize their published articles in volumes and issues, so these fields are optional. Some electronic journals do not provide a page range, but instead list an article identifier. In a case like this it's safe to use the article identifier instead of the page range.

A journal article with 1 author

Zwier, T. S. Chemistry. The structure of protonated water clusters. Science 304, 1119–1120 (2004).

A journal article with 2 authors

Gollisch, T. & Meister, M. Rapid neural coding in the retina with relative spike latencies. Science 319, 1108–1111 (2008).

A journal article with 3 authors

Grubb, P. J., Coomes, D. A. & Metcalfe, D. J. Comment on ‘A brief history of seed size’. Science 310, 783; author reply 783 (2005).

A journal article with 6 or more authors

Hardy, J. et al. Extracellular replication of Listeria monocytogenes in the murine gall bladder. Science 303, 851–853 (2004).

Books and book chapters

Here are examples of references for authored and edited books as well as book chapters.

An authored book

Drake, P. P. & Fabozzi, F. J. The Basics of Finance. (John Wiley & Sons, Inc., 2010).

An edited book

Biomarkers in Cancer. (Springer Netherlands, 2015).

A chapter in an edited book

Fernández, N., Arias, J., Sánchez, L., Fuentes-Lorenzo, D. & Corcho, Ó. RDSZ: An Approach for Lossless RDF Stream Compression. in The Semantic Web: Trends and Challenges: 11th International Conference, ESWC 2014, Anissaras, Crete, Greece, May 25-29, 2014. Proceedings (eds. Presutti, V. et al.) 52–67 (Springer International Publishing, 2014).

Web sites

Sometimes references to web sites should appear directly in the text rather than in the bibliography. Refer to the Instructions to authors for Nature Methods.

Blog post

Hale, T. NASA Animate The Beauty Of Drone Aerodynamics. IFLScience https://www.iflscience.com/technology/nasa-animate-the-beauty-of-drone-aerodynamics/ (2017).

Reports

This example shows the general structure used for government reports, technical reports, and scientific reports. If you can't locate the report number then it might be better to cite the report as a book. For reports it is usually not individual people that are credited as authors, but a governmental department or agency like "U. S. Food and Drug Administration" or "National Cancer Institute".

Government report

Government Accountability Office. Airport Improvement Program: Update of Allocation of Funds and Passenger Facility Charges, 1992-94. (1995).

Theses and dissertations

Theses including Ph.D. dissertations, Master's theses or Bachelor theses follow the basic format outlined below.

Doctoral dissertation

Cook, E. J. Older Americans Act of 1965, Title III: A policy analysis. (California State University, Long Beach, 2013).

News paper articles

Unlike scholarly journals, news papers do not usually have a volume and issue number. Instead, the full date and page number is required for a correct reference.

New York Times article

Williams, J. Top of the Class. New York Times BR6 (2016).

In-text citations

References should be cited in the text by sequential numbers in superscript:

This sentence cites one reference ¹.
This sentence cites two references ^1,2.
This sentence cites four references ^1–4.

About the journal

Full journal title	Nature Methods
Abbreviation	Nat. Methods
ISSN (print)	1548-7091
ISSN (online)	1548-7105
Scope	Biochemistry Biotechnology Cell Biology Molecular Biology